This page hosts example output of AA_stat tool for several datasets. The list of datasets corresponds to Supplementary Table S1 in this biorXiv preprint.

# Dataset open search + AA_stat open search w/ variable mods + AA_stat closed search
1 PXD014565 TMT subset 63 view report   peptide table
2 PXD014565 TMT subset 61 view report   peptide table
3 PXD009775 subset Exp1_Rep1 view report   peptide table
4 O-glycosylation dataset PXD009955, subset 140721 view report view report peptide table
5 O-glycosylation dataset PXD009955, subset 140718 view report view report peptide table
6 N-glycosylation dataset PXD003561, subset A301 view report   peptide table
7 acetylation dataset PXD009994, subset 20160929 view report   peptide table
8 O-glycosylation dataset PXD015987, subset man view report   peptide table
9 PXD014565 SILAC subset 22206 view report view report peptide table
10 PXD014565 SILAC subset 22202 view report view report peptide table
11 N-glycosylation dataset PXD003561, subset ACH view report   peptide table
12 methylation dataset PXD009070, subset HF170411 view report   peptide table
13 PXD014565 SILAC subset 22200 view report   peptide table
14 PXD014565 SILAC subset 22204 view report   peptide table
15 PXD014565 SILAC subset 22208 view report   peptide table
16 CPTAC colon cancer data from study S037 (sample 01) view report   peptide table

Additionally, we provide the AA_stat report on all of CPTAC colon cancer data from study S037.

AA_stat results on synthetic modified peptides